Toxins
In the absence of oxygen, conditions are created in which toxic chemical species are generated, reduced forms of iron (Fe2 + ) and manganese (Mn2+), for example, being more soluble, and therefore more chemically reactive, than their oxidised forms (Fe3+, Mn4+). Reduction of these metals, which will not occur until oxygen and nitrates have been completely exhausted, is carried out by anaerobic bacteria.
Sulphates (SO4), too, are reduced, in the total absence of oxygen or nitrates, to iron sulphide (FeS) or hydrogen sulphide (H2S), again by anaerobic bacteria. In the absence of iron, H2S, which is highly toxic, will be produced as a gas; its release when anaerobic sediments are physically disturbed gives off the distinctive sulphurous smell characteristic of wetland soils.
Under extremely anaerobic conditions, methanogenic bacteria reduce carbon dioxide (CO2) to methane (CH4), another gas which is toxic at high concentrations.